T R A N S D U C T I O N
Lecture 14: T R A N S D U C T I O N
- Brief Review of Methods of Genetic Transfer
- "Sexduction"/Conjugation One species actively transmits its genes directly to another member of the species.
- Transformation Naked DNA moves from the surrounding medium into a cell and is incorporated.
- Transduction Viruses are the vector as they move genes from cell to cell.
- Lysogeny Revisited
- Requirement for a dependent virus What would happen were it an autonomous virus?
- Integrative strategy
- Integration
LEGEND
- att: an E.coli seqence for the "attachment" or integration of lambda's circular chromosome.
- oriC: E.coli's origin of Chromosome replication (given here for orientation only)
- gal: E.coli's gene for galactose utilization
- pe:prophage ends (site of integration)
- cos: joined sticky ends of vegetative DNA; sometimes called ve ("vegetative ends")
- int: gene for the enzyme integrase
- c: gene for lambda repressor to maintain lysogeny
- Q: another gene concerned with lysogeny
- h: the last of the many capsomer genes.
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- Normal Excision
- Non-Integrative Strategies
- Transduction
- Specialized Transduction
The transduced gene(s) are always the same ones.
- Unique att
- Excision accidents a la Allen Campbell (Stanford U)
- Defective virions (a contradiction of terms?) In exchange for picking up a few host genes, they must leave behind a few of their own genes. In the case of lambda, it leaves behind some of its late genes for capsomers in exchange for the galactose-operon.
- Infection and Integration When these infect a host cell, the most they can do is lysogenize, because they don't have some of the genes for lysis. When integrating into the host's chromosome, they provide the cell with a few genes from the former host cell. In the case of lambda-dg, a cell that was formerly incapable of metabolising galactose, can do so once lambda-dg has integrated.
- Lytic propagation and Helper viruses How then are phages such as lambda-dg propagated when they do not possess the enzymes necessary for a lytic phase?
- Inactivate the lambda repressor in the host lysogenized with the defective prophage
- Superinfect with a normal lambda
- Now both lambdas in the cell will be able to propagate. The burst will contain both normal lambdas as well as lambda-dg's
- Generalized Transduction Virtually any of the host's genes may to transduced, though, as we shall see, not necesssarily with all the same efficiencies.
- Phage P1
- Non-Integrative Lysogeny
- Plasmid-like state
- Maintenance problems of low copy number per cell
- Partitioning of prophages into daughter cells
- Lysis
- Packaging of the virions
- Miswrapping of the host DNA
- Usefulness in cotransduction measurements
- Phage Mu-1 (not µ-1)
- Integrative lysogeny
- Formation of mutated lysogens
- Requirement for both lysogeny and lytic routes
- Transposon-like action
- Virionic DNA
- 38 kbp ( = ? cistrons)
- Melted/Reannealed under electron microscope
- Gene probes
- Replication of DNA
- Procuring 'headfuls' of DNA
- Fixed site first cut
- Measured second site cut
- Usefulness
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